Metabolon @

ASHG 2023: American Society of Human Genetics Annual Meeting 2023, Washington, D.C.

The ASHG Conference 2023 – Annual Meeting is the largest human genetics and genomics meeting and exposition in the world, bringing together more than 7,000 professionals of all stages in the genetics community as well as members of complementary life sciences applications.

Building on the momentum from 2022, we are thrilled to be returning to the ASHG 2023 Conference as an exhibitor and speaker, discussing the complementary role metabolomics plays alongside genomics workflows.

Booth No. 1622

Oral Presentation

Multiomic Models of Aging: Predicting Biological Age with Genomics, Proteomics, and Metabolomics to Elucidate the Molecular Mechanisms of Aging.

Date: Thursday, November 2nd, 3:30-4:30 PM
Location: Room 143C

Speaker

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Dr. Jessica Lasky-Su

Dr. Jessica Lasky-Su

Dr. Lasky-Su has been a leader in applying metabolomics research to epidemiology, covering a range of chronic diseases over the life course, with a focus on respiratory outcomes (e.g. asthma). Much of her work has focused on “integrative metabolomics” - the integration other omics with using a metabolomic-centric perspective to study complex diseases. With integrative metabolomics as an emerging field, Dr. Lasky’s scholarship has contributed broadly, with peer-reviewed publications that focus on a range of disease outcomes (cancers, respiratory, ocular, infections, metabolic, neurodevelopment/mental health) and exposures (air pollutants, PFAS, nutrition, exercise) that may have an impact on health over the life course. Her investigative success is also demonstrated with >225 peer-reviewed publications. To date, she has been invited to give > 60 national and international talks. The breadth of chronic disease outcomes that Dr. Lasky-Su has studied prompted her to study multiomics and aging over the life course using the Mass General Brigham (MGB-Biobank), where she has generated a large, prospective, curated biobank cohort with multiomic data. Through these efforts Dr. Lasky-Su has created robust biological aging clocks with epigenetics, metabolomics, and proteomics. Dr. Lasky-Su’s leadership is metabolomics well-acknowledged, as the most recent past president of the Metabolomics Society – the largest metabolomics society in the world – and the chairman of the NIH’s Consortium of Metabolomics Studies (COMETS) consortium – the largest international consortium of prospective metabolomics cohorts – over the past four years. She has also spearheaded new efforts, including initiating STROBE-metabolomics to provide reporting guidelines in this area, and the Metabolomic Epidemiology Task Group to define and formalize this emerging field of study. In addition, Dr. Lasky-Su has extensive funding in multiomics; she is the PI/MPI of 4 current NIH R01s in metabolomics, the PI on multiple private grants, and the Consortium PI several R/U NIH grants. Her success is also reflected in the success of her mentees and co-mentees who have received K grants and gone on to have successful research careers, with some achieving a rank as high as Full Professor.

Abstract

Biological age provides a synthesized measure of an individual’s physiological state and is a critical predictor of morbidity and mortality risk. While other omics have been used to predict biological age, limited research has assessed the relationship between biological aging and metabolomics, which may provide molecular drivers of the aging process. In this study, we developed a robust biological aging phenotype using ~30 clinical labs and electronic medical records on >30.000 people from the Mass General Brigham Biobank. We demonstrated the robustness of BioAge by applying this Lasso/Cox approach at four time points in the associated electronic medical records. BioAge had correlations of >0.98 with the other estimates, demonstrating that our prediction model is highly reproducible when created using different EMR data. We created biological aging predictive models for three omic data types (DNAm, metabolomics, proteomics) using individuals from the MGB-Biobank. For each omic model, the sample was split into training and testing sets and applied elastic net regression to select the omic variants to be retained in the final predictive model. For all three models, the training and testing correlations were greater than 0.90 and 0.84 respectively. We further created a multiomic-informed BioAge predictor by using the metabolomic and proteomic data to further reduce the error in the DNAm model. Using this approach, we created a final multiomic model with an RSME = 2.4 and a training and testing correlation of 0.97 and 0.92 respectively. We identified that the multiomic predicted biological age is associated with a significantly increased risk of adverse health outcomes, including all-cause mortality, cardiovascular disease, and cancer. Our results highlight the potential of multiomics for predicting biological age, establishing personalized anti-aging strategies, and elucidating the molecular mechanisms of aging that may ultimately promote healthy aging and longevity.

Poster Presentation

Global Metabolomics is a Powerful Tool for Diagnosing Rare Diseases Devoid of Clear Genetic Casualties.
Date:
Saturday, November 4th, 2:15-4:15 PM
Session: 122
Location: Board no. PB3390

Schedule a Meeting

References

1. Zgoda-Pols, J.R., et al., Metabolomics analysis reveals elevation of 3-indoxyl sulfate in plasma and brain during chemically-induced acute kidney injury in mice: investigation of nicotinic acid receptor agonists. Toxicol Appl Pharmacol, 2011. 255(1): p. 48-56.

2. Bryant, J.A., et al., The impact of an oral purified microbiome therapeutic on the gastrointestinal microbiome. Nat Med, 2026. 32(1): p. 186-196

3. McGovern, B .H., et al., SER-109, an Investigational Microbiome Drugto Reduce Recurrence After Clostridioides difficile Infection: Lessons Learned From a Phase 2 Trial. Clin Infect Dis, 2021. 72(12): p. 2132-2140.

4. Feuerstadt, P., et al., SER-109, an Oral Microbiome Therapy for Recurrent Clostridioides difficile Infection. N Engl J Med, 2022. 386(3): p. 220-229.

5. Hu, Z., et al., Targeted metabolomics reveals novel diagnostic biomarkers for colorectal cancer. Mol Oncol, 2025. 19(6): p. 1737-1750.

6. Butler, F.M., et al., Vegetarian Dietary Patterns and Diet-Related Metabolites Are Associated With Kidney Function in the Adventist Health Study-2 Cohort. J Ren Nutr, 2025.

7. Stanford, J., et al., Metabolomic Profiling and Diet Quality Scoring in a Randomized Crossover Trial of Healthy and Typical Dietary Patterns. Mol Nutr Food Res, 2025 . 69(23): p. e70271.

8. O’Connor, L.E., et al., Metabolomic Profiling of an Ultraprocessed Dietary Pattern in a Domiciled Randomized Controlled Crossover Feeding Trial. J Nutr, 2023. 153(8): p. 2181-2192.

9. Fritsch, D.A., et al., Microbiome function underpins the efficacy of a fiber-supplemented dietary intervention in dogs with chronic large bowel diarrhea. BMC Vet Res, 2022. 18(1): p. 245.

10. Leal, L.N., et al., Preweaning nutrient supply improves lactation productivity and reduces the risk of culling in Holstein cows. J Dairy Sci, 2025. 108(6): p. 5875-5888.

11. Ahsin, M., et al., Soil and pasture health underlie improved beef nutrient density determined by untargeted metabolomics in Southern US grass finished beef systems. NPJ Sci Food, 2025. 9(1): p. 151.

12. Yin, W., et al., Plasma lipid profiling across species for the identification of optimal animal models of human dyslipidemia. J Lipid Res, 2012. 53(1): p. 51-65.

13. Porter, F .D., et al., Cholesterol oxidation products are sensitive and specific blood-based biomarkers for Niemann-Pick C1 disease. Sci Transl Med, 2010. 2(56): p. 56ra81.

14. Needham, B .D., et al., Plasma and Fecal Metabolite Profiles in Autism Spectrum Disorder. Biol Psychiatry, 2021. 89(5): p. 451-462

15. Li, C., et al., Estradiol and mTORC2 cooperate to enhance prostaglandin biosynthesis and tumorigenesis in TSC2-deficient LAM cells. J Exp Med, 2014. 211(1): p. 15-28.

16. Green, P.G., et al., Metabolic flexibility and reverse remodelling of the failing human heart. Eur Heart J, 2025. 46(25): p. 2422-2433.

17. Maekawa, H., et al., SGLT2 inhibition protects kidney function by SAM-dependent epigenetic repression of inflammatory genes under metabolic stress. J Clin Invest, 2025. 135(19).

18. Wu, D., et al., Integrated screens reveal that guanine nucleotide depletion, which is irreversible via targeting IMPDH2, inhibits pancreatic cancer and potentiates KRAS inhibition. Gut, 2026.

19. Schwerdtfeger, L.A., et al., Gut microbiota and metabolites are linked to disease progression in multiple sclerosis. Cell Rep Med, 2025. 6(4): p. 102055.

20. Wu, H., et al., Microbiome-metabolome dynamics associated with impaired glucose control and responses to lifestyle changes. Nat Med, 2025. 31(7): p. 2222-2231.

21. Jacobs, J.P., et al., Cognitive behavioral therapy for irritable bowel syndrome induces bidirectional alterations in the brain-gut-microbiome axis associated with gastrointestinal symptom improvement. Microbiome, 2021. 9(1): p. 236.

22. Pietzner, M., et al., Plasma metabolites to profile pathways in noncommunicable disease multimorbidity. Nat Med, 2021. 27(3): p. 471-479.

23. Faquih, T.O., et al., Robust Metabolomic Age Prediction Based on a Wide Selection of Metabolites. J Gerontol A Biol Sci Med Sci, 2025. 80(3).

24. Scherer, N., et al., Coupling metabolomics and exome sequencing reveals graded effects of rare damaging heterozygous variants on gene function and human traits. Nat Genet, 2025. 57(1): p. 193-205.

25. Holmes, Z.C., et al., Untargeted metabolomic analysis of human milk from healthy mothers reveals drivers of metabolite variability. Sci Rep, 2024. 14(1): p. 20827.

26. Titz, B., et al., Implications of Ocular Confounding Factors for Aqueous Humor Proteomic and Metabolomic Analyses in Retinal Diseases. Transl Vis Sci Technol, 2024. 13(6): p. 17.

27. Bloom, S.M., et al., Cysteine dependence of Lactobacillus iners is a potential therapeutic target for vaginal microbiota modulation. Nat Microbiol, 2022. 7(3): p. 434-450.

28. Leimer, E.M., et al., Lipid profile of human synovial fluid following intra-articular ankle fracture. J Orthop Res, 2017. 35(3): p. 657-666.