Research Areas

Veterinary and Animal Health

farmer works with cattle at a farm

Introduction

Animal science is a broad field that addresses many important topics related to best practices/animal welfare, disease detection, animal husbandry, genomics of food animals, and biomarker discovery for highly desirable traits, among others.

Metabolomics is a rapidly growing field with a wide application base that is frequently applied to animal research studies to provide phenotypic context to physiological and pathophysiological processes. Here, we discuss several cases where metabolomics helped elucidate important insights in animal research studies.

Case Studies

Nutritional Intervention

Cats with chronic kidney disease (CKD) have trouble maintaining body weight due to muscle wasting. Betaine is known to protect the kidney from water imbalance and prebiotics can increase nutrient absorption and favorably modulate the gut microbiome. In this study, Hall and colleagues evaluated the combined effects of feeding betaine and prebiotics on body weight of both CKD and healthy cats1.

All study animals were fed pre-trial food for 28 days then randomly assigned to control or test food for 8 weeks. After 8 weeks each group crossed over to the alternative food for 8 weeks. At the end of each feeding period biomarkers of kidney function were analyzed in plasma, urine, and fecal samples. Total body mass index was also measured. CKD cats that consumed the test food had significantly higher body weight than the control food group. Test food did not affect total body mass index of healthy cats.

Indole compounds produced by bacterial metabolism decreased in urine and increased in feces of CKD cats fed test food. Plasma concentrations were negatively correlated with the level of kidney function, indicating a potential benefit of consuming test food. Altogether, these results suggest that betaine and prebiotics may increase total body mass index of CKD cats by enhancing one-carbon metabolism.

Scientist works with a mass spectrometer

Why Metabolon?

Once you see the full value of metabolomics, the only remaining question is: who does it best? While many laboratories have metabolite profiling or analytical chemistry capabilities, comprehensive metabolomics technologies are extremely rare.

Accurate, unbiased metabolite identification across the entire metabolome introduces signal-to-noise challenges that very few labs are equipped to handle. Also, translating massive quantities of data into actionable information is slow, if not impossible, for most because proper interpretation takes two things that are in short supply: experience and a comprehensive database.

Partner with Metabolon to access:

  • A library of 5,400+ known metabolites, 2,000 in human plasma, all referenced in the context of biochemical pathways. That’s 5x the metabolites of the closest competitor.
  • Unparalleled depth and breadth of experience analyzing and interpreting metabolomics data to find meaningful results
    • 10,000+ projects with hundreds of clients
    • 3,500+ publications covering 500 diseases, including numerous peer-reviewed journals such as Cell, Nature and Science
    • Nearly 40 PhDs in data science, molecular biology, and biochemistry

Using our robust platform and visualization tools, our experts are uniquely able to tell you more about your molecule and develop assay panels to help you zero in on the results you need.

Only Metabolon has all four core metabolomics capabilities:

Metabolon’s Latest Publications

Talk with an expert

For over 20 years Metabolon has been helping scientists use, understand, and integrate metabolomics into their studies to drive discovery and innovation. To see how Metabolon’s industry-leading metabolomics platform and software, and scientific experts can help you take advantage of metabolomics in your studies, speak with one of our experts here.

Contact Metabolon

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References

1. Hall, J.A., D.E. Jewell, and E. Ephraim, Feeding cats with chronic kidney disease food supplemented with betaine and prebiotics increases total body mass and reduces uremic toxins. PLoS One, 2022. 17(5): p. e0268624.

2. Barko, P.C., et al., Untargeted Analysis of Serum Metabolomes in Dogs with Exocrine Pancreatic Insufficiency. Animals (Basel), 2023. 13(14).

3. Pakula, P.D., et al., Characterization of exercise-induced hemolysis in endurance horses. Front Vet Sci, 2023. 10: p. 1115776.

4. Marsilio, S., et al., Untargeted metabolomic analysis in cats with naturally occurring inflammatory bowel disease and alimentary small cell lymphoma. Sci Rep, 2021. 11(1): p. 9198.

References

1. Zgoda-Pols, J.R., et al., Metabolomics analysis reveals elevation of 3-indoxyl sulfate in plasma and brain during chemically-induced acute kidney injury in mice: investigation of nicotinic acid receptor agonists. Toxicol Appl Pharmacol, 2011. 255(1): p. 48-56.

2. Bryant, J.A., et al., The impact of an oral purified microbiome therapeutic on the gastrointestinal microbiome. Nat Med, 2026. 32(1): p. 186-196

3. McGovern, B .H., et al., SER-109, an Investigational Microbiome Drugto Reduce Recurrence After Clostridioides difficile Infection: Lessons Learned From a Phase 2 Trial. Clin Infect Dis, 2021. 72(12): p. 2132-2140.

4. Feuerstadt, P., et al., SER-109, an Oral Microbiome Therapy for Recurrent Clostridioides difficile Infection. N Engl J Med, 2022. 386(3): p. 220-229.

5. Hu, Z., et al., Targeted metabolomics reveals novel diagnostic biomarkers for colorectal cancer. Mol Oncol, 2025. 19(6): p. 1737-1750.

6. Butler, F.M., et al., Vegetarian Dietary Patterns and Diet-Related Metabolites Are Associated With Kidney Function in the Adventist Health Study-2 Cohort. J Ren Nutr, 2025.

7. Stanford, J., et al., Metabolomic Profiling and Diet Quality Scoring in a Randomized Crossover Trial of Healthy and Typical Dietary Patterns. Mol Nutr Food Res, 2025 . 69(23): p. e70271.

8. O’Connor, L.E., et al., Metabolomic Profiling of an Ultraprocessed Dietary Pattern in a Domiciled Randomized Controlled Crossover Feeding Trial. J Nutr, 2023. 153(8): p. 2181-2192.

9. Fritsch, D.A., et al., Microbiome function underpins the efficacy of a fiber-supplemented dietary intervention in dogs with chronic large bowel diarrhea. BMC Vet Res, 2022. 18(1): p. 245.

10. Leal, L.N., et al., Preweaning nutrient supply improves lactation productivity and reduces the risk of culling in Holstein cows. J Dairy Sci, 2025. 108(6): p. 5875-5888.

11. Ahsin, M., et al., Soil and pasture health underlie improved beef nutrient density determined by untargeted metabolomics in Southern US grass finished beef systems. NPJ Sci Food, 2025. 9(1): p. 151.

12. Yin, W., et al., Plasma lipid profiling across species for the identification of optimal animal models of human dyslipidemia. J Lipid Res, 2012. 53(1): p. 51-65.

13. Porter, F .D., et al., Cholesterol oxidation products are sensitive and specific blood-based biomarkers for Niemann-Pick C1 disease. Sci Transl Med, 2010. 2(56): p. 56ra81.

14. Needham, B .D., et al., Plasma and Fecal Metabolite Profiles in Autism Spectrum Disorder. Biol Psychiatry, 2021. 89(5): p. 451-462

15. Li, C., et al., Estradiol and mTORC2 cooperate to enhance prostaglandin biosynthesis and tumorigenesis in TSC2-deficient LAM cells. J Exp Med, 2014. 211(1): p. 15-28.

16. Green, P.G., et al., Metabolic flexibility and reverse remodelling of the failing human heart. Eur Heart J, 2025. 46(25): p. 2422-2433.

17. Maekawa, H., et al., SGLT2 inhibition protects kidney function by SAM-dependent epigenetic repression of inflammatory genes under metabolic stress. J Clin Invest, 2025. 135(19).

18. Wu, D., et al., Integrated screens reveal that guanine nucleotide depletion, which is irreversible via targeting IMPDH2, inhibits pancreatic cancer and potentiates KRAS inhibition. Gut, 2026.

19. Schwerdtfeger, L.A., et al., Gut microbiota and metabolites are linked to disease progression in multiple sclerosis. Cell Rep Med, 2025. 6(4): p. 102055.

20. Wu, H., et al., Microbiome-metabolome dynamics associated with impaired glucose control and responses to lifestyle changes. Nat Med, 2025. 31(7): p. 2222-2231.

21. Jacobs, J.P., et al., Cognitive behavioral therapy for irritable bowel syndrome induces bidirectional alterations in the brain-gut-microbiome axis associated with gastrointestinal symptom improvement. Microbiome, 2021. 9(1): p. 236.

22. Pietzner, M., et al., Plasma metabolites to profile pathways in noncommunicable disease multimorbidity. Nat Med, 2021. 27(3): p. 471-479.

23. Faquih, T.O., et al., Robust Metabolomic Age Prediction Based on a Wide Selection of Metabolites. J Gerontol A Biol Sci Med Sci, 2025. 80(3).

24. Scherer, N., et al., Coupling metabolomics and exome sequencing reveals graded effects of rare damaging heterozygous variants on gene function and human traits. Nat Genet, 2025. 57(1): p. 193-205.

25. Holmes, Z.C., et al., Untargeted metabolomic analysis of human milk from healthy mothers reveals drivers of metabolite variability. Sci Rep, 2024. 14(1): p. 20827.

26. Titz, B., et al., Implications of Ocular Confounding Factors for Aqueous Humor Proteomic and Metabolomic Analyses in Retinal Diseases. Transl Vis Sci Technol, 2024. 13(6): p. 17.

27. Bloom, S.M., et al., Cysteine dependence of Lactobacillus iners is a potential therapeutic target for vaginal microbiota modulation. Nat Microbiol, 2022. 7(3): p. 434-450.

28. Leimer, E.M., et al., Lipid profile of human synovial fluid following intra-articular ankle fracture. J Orthop Res, 2017. 35(3): p. 657-666.